Publications

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Journal Article
Activities of Topoisomerase I in Its Complex with SRSF1., Ishikawa, Takao, Krzyśko Krystiana A., Kowalska-Loth Barbara, Skrajna Aleksandra M., Czubaty Alicja, Girstun Agnieszka, Cieplak Maja K., Lesyng Bogdan, and Staron Krzysztof , Biochemistry, 02/2012, (2012)
CASP6 data processing and automatic evaluation at the protein structure prediction center., Kryshtafovych, Andriy, Milostan Maciej, Szajkowski Lukasz, Daniluk Paweł, and Fidelis Krzysztof , Proteins, 2005, Volume 61 Suppl 7, p.19-23, (2005)
A concept for G protein activation by G protein-coupled receptor dimers: the transducin/rhodopsin interface., Filipek, Sławomir, Krzyśko Krystiana A., Fotiadis Dimitrios, Liang Yan, Saperstein David A., Engel Andreas, and Palczewski Krzysztof , Photochemical & photobiological sciences : Official journal of the European Photochemistry Association and the European Society for Photobiology, 2004 Jun, Volume 3, Issue 6, p.628-38, (2004)
Extraction of biomedical traits for patients with Amyotrophic Lateral Sclerosis using parallel and hierarchical classifiers, Jóźwik, Adam, Sokołowska Beata, Niebroj-Dobosz Irena, and Janik P. , International Journal of Biometrics, Volume 3, Number 1, p.85–94, (2011)
A genistein derivative, ITB-301, induces microtubule depolymerization and mitotic arrest in multidrug-resistant ovarian cancer., Ahmed, Ahmed Ashour, Goldsmith Juliet, Fokt Izabela, Le Xiao-Feng, Krzyśko Krystiana A., Lesyng Bogdan, Bast Robert C., and Priebe Waldemar , Cancer chemotherapy and pharmacology, 10/2011, Volume 68, Issue 4, p.1033-44, (2011)
Interaction model based on local protein substructures generalizes to the entire structural enzyme-ligand space., Strömbergsson, Helena, Daniluk Paweł, Kryshtafovych Andriy, Fidelis Krzysztof, Wikberg Jarl E. S., Kleywegt Gerard J., and Hvidsten Torgeir R. , Journal of chemical information and modeling, 2008 Nov, Volume 48, Issue 11, p.2278-88, (2008)
Molecular models of the interface between anterior pharynx-defective protein 1 (APH-1) and presenilin involving GxxxG motifs., Jozwiak, Krzysztof, Krzyśko Krystiana A., Bojarski Lukasz, Gacia Magdalena, and Filipek Sławomir , ChemMedChem, 2008 Apr, Volume 3, Issue 4, p.627-34, (2008)
New tools and expanded data analysis capabilities at the Protein Structure Prediction Center., Kryshtafovych, Andriy, Prlic Andreas, Dmytriv Zinoviy, Daniluk Paweł, Milostan Maciej, Eyrich Volker, Hubbard Tim, and Fidelis Krzysztof , Proteins, 2007, Volume 69 Suppl 8, p.19-26, (2007)
A novel method to compare protein structures using local descriptors., Daniluk, Paweł, and Lesyng Bogdan , BMC bioinformatics, 08/2011, Volume 12, p.344, (2011)
Protein structure prediction center in CASP8., Kryshtafovych, Andriy, Krysko Oleh, Daniluk Paweł, Dmytriv Zinoviy, and Fidelis Krzysztof , Proteins, 2009, Volume 77 Suppl 9, p.5-9, (2009)
Pulling single bacteriorhodopsin out of a membrane: Comparison of simulation and experiment., Cieplak, Marek, Filipek Sławomir, Janovjak Harald, and Krzyśko Krystiana A. , Biochimica et biophysica acta, 2006 Apr, Volume 1758, Issue 4, p.537-44, (2006)
Two novel presenilin 1 gene mutations connected with frontotemporal dementia-like clinical phenotype: genetic and bioinformatic assessment., Zekanowski, Cezary, Golan Maciej P., Krzyśko Krystiana A., Lipczyńska-Łojkowska Wanda, Filipek Sławomir, Kowalska Anna, Rossa Grzegorz, Pepłońska Beata, Styczyńska Maria, Maruszak Aleksandra, et al. , Experimental neurology, 2006 Jul, Volume 200, Issue 1, p.82-8, (2006)
Using multi-data hidden Markov models trained on local neighborhoods of protein structure to predict residue-residue contacts., Björkholm, Patrik, Daniluk Paweł, Kryshtafovych Andriy, Fidelis Krzysztof, Andersson Robin, and Hvidsten Torgeir R. , Bioinformatics (Oxford, England), 2009 May 15, Volume 25, Issue 10, p.1264-70, (2009)