Publications

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2005
CASP6 data processing and automatic evaluation at the protein structure prediction center., Kryshtafovych, Andriy, Milostan Maciej, Szajkowski Lukasz, Daniluk Paweł, and Fidelis Krzysztof , Proteins, 2005, Volume 61 Suppl 7, p.19-23, (2005)
2007
New tools and expanded data analysis capabilities at the Protein Structure Prediction Center., Kryshtafovych, Andriy, Prlic Andreas, Dmytriv Zinoviy, Daniluk Paweł, Milostan Maciej, Eyrich Volker, Hubbard Tim, and Fidelis Krzysztof , Proteins, 2007, Volume 69 Suppl 8, p.19-26, (2007)
2008
Interaction model based on local protein substructures generalizes to the entire structural enzyme-ligand space., Strömbergsson, Helena, Daniluk Paweł, Kryshtafovych Andriy, Fidelis Krzysztof, Wikberg Jarl E. S., Kleywegt Gerard J., and Hvidsten Torgeir R. , Journal of chemical information and modeling, 2008 Nov, Volume 48, Issue 11, p.2278-88, (2008)
2009
Protein structure prediction center in CASP8., Kryshtafovych, Andriy, Krysko Oleh, Daniluk Paweł, Dmytriv Zinoviy, and Fidelis Krzysztof , Proteins, 2009, Volume 77 Suppl 9, p.5-9, (2009)
Using multi-data hidden Markov models trained on local neighborhoods of protein structure to predict residue-residue contacts., Björkholm, Patrik, Daniluk Paweł, Kryshtafovych Andriy, Fidelis Krzysztof, Andersson Robin, and Hvidsten Torgeir R. , Bioinformatics (Oxford, England), 2009 May 15, Volume 25, Issue 10, p.1264-70, (2009)
2011
A novel method to compare protein structures using local descriptors., Daniluk, Paweł, and Lesyng Bogdan , BMC bioinformatics, 08/2011, Volume 12, p.344, (2011)