Interaction model based on local protein substructures generalizes to the entire structural enzyme-ligand space.,
Strömbergsson, Helena, Daniluk Paweł, Kryshtafovych Andriy, Fidelis Krzysztof, Wikberg Jarl E. S., Kleywegt Gerard J., and Hvidsten Torgeir R.
, Journal of chemical information and modeling, 2008 Nov, Volume 48, Issue 11, p.2278-88, (2008)
Protein structure prediction center in CASP8.,
Kryshtafovych, Andriy, Krysko Oleh, Daniluk Paweł, Dmytriv Zinoviy, and Fidelis Krzysztof
, Proteins, 2009, Volume 77 Suppl 9, p.5-9, (2009)
Using multi-data hidden Markov models trained on local neighborhoods of protein structure to predict residue-residue contacts.,
Björkholm, Patrik, Daniluk Paweł, Kryshtafovych Andriy, Fidelis Krzysztof, Andersson Robin, and Hvidsten Torgeir R.
, Bioinformatics (Oxford, England), 2009 May 15, Volume 25, Issue 10, p.1264-70, (2009)